STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_06876Uncharacterized protein. (926 aa)    
Predicted Functional Partners:
ALC56_12170
Gamma-aminobutyric acid receptor-associated protein.
   
 0.945
ALC56_10271
Microtubule-associated proteins 1A/1B light chain 3A.
   
 0.912
ALC56_11818
Ubiquitin-40S ribosomal protein S27a.
   
 0.890
ALC56_10170
Gamma-glutamylcyclotransferase.
   
 0.890
ALC56_01898
Ubiquitin-60S ribosomal protein L40.
    
 0.883
ALC56_07395
N_BRCA1_IG domain-containing protein.
    
 0.869
ALC56_07649
Uncharacterized protein.
    
 0.858
ALC56_07648
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.858
ALC56_00306
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins.
    
 0.834
ALC56_00415
Autophagy protein 5; Involved in autophagic vesicle formation.
    
 0.833
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.