STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_05374Multiple epidermal growth factor-like domains protein 8. (2960 aa)    
Predicted Functional Partners:
ALC56_14140
E3 SUMO-protein ligase RanBP2.
    
 0.685
ALC56_10516
OBG-type G domain-containing protein.
    
   0.685
ALC56_00909
UPF0428 protein CXorf56 like protein.
    
   0.674
ALC56_13599
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
    
   0.674
ALC56_10479
UPF0235 protein C15orf40 like protein.
    
   0.674
ALC56_07431
Tricarboxylate transport protein, mitochondrial; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.674
ALC56_04818
ADP,ATP carrier protein 2; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.642
ALC56_01355
Developmentally-regulated GTP-binding protein 2.
    
   0.642
ALC56_05616
ADP,ATP carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.642
ALC56_07836
Vesicle-fusing ATPase 1.
    
  0.629
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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