Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALC56_02953 | ALC56_03974 | A0A195FQ64 | A0A151JYS6 | Ubiquilin-1. | AP-1 complex subunit gamma. | 0.677 |
ALC56_02953 | ALC56_04666 | A0A195FQ64 | A0A151JYC7 | Ubiquilin-1. | Transmembrane emp24 domain-containing protein 7. | 0.458 |
ALC56_02953 | ALC56_05449 | A0A195FQ64 | A0A195FKI0 | Ubiquilin-1. | Facilitated trehalose transporter Tret1. | 0.510 |
ALC56_02953 | ALC56_06222 | A0A195FQ64 | A0A151JX31 | Ubiquilin-1. | Putative ATP-dependent RNA helicase DHX34. | 0.968 |
ALC56_02953 | ALC56_07433 | A0A195FQ64 | A0A195FDW1 | Ubiquilin-1. | AP complex subunit beta. | 0.699 |
ALC56_02953 | ALC56_10457 | A0A195FQ64 | A0A195F533 | Ubiquilin-1. | 39S ribosomal protein L15, mitochondrial. | 0.952 |
ALC56_02953 | ALC56_11748 | A0A195FQ64 | A0A195F1F7 | Ubiquilin-1. | Cation-independent mannose-6-phosphate receptor. | 0.709 |
ALC56_02953 | ALC56_13110 | A0A195FQ64 | A0A195EWM1 | Ubiquilin-1. | Uncharacterized protein. | 0.657 |
ALC56_02953 | ALC56_14051 | A0A195FQ64 | A0A151JTU0 | Ubiquilin-1. | AP-2 complex subunit alpha; Adaptins are components of the adapter complexes which link clathrin to receptors in coated vesicles. | 0.749 |
ALC56_03974 | ALC56_02953 | A0A151JYS6 | A0A195FQ64 | AP-1 complex subunit gamma. | Ubiquilin-1. | 0.677 |
ALC56_03974 | ALC56_04857 | A0A151JYS6 | A0A195FJG4 | AP-1 complex subunit gamma. | Vesicular acetylcholine transporter. | 0.632 |
ALC56_03974 | ALC56_05449 | A0A151JYS6 | A0A195FKI0 | AP-1 complex subunit gamma. | Facilitated trehalose transporter Tret1. | 0.472 |
ALC56_03974 | ALC56_07433 | A0A151JYS6 | A0A195FDW1 | AP-1 complex subunit gamma. | AP complex subunit beta. | 0.999 |
ALC56_03974 | ALC56_11748 | A0A151JYS6 | A0A195F1F7 | AP-1 complex subunit gamma. | Cation-independent mannose-6-phosphate receptor. | 0.765 |
ALC56_03974 | ALC56_13110 | A0A151JYS6 | A0A195EWM1 | AP-1 complex subunit gamma. | Uncharacterized protein. | 0.640 |
ALC56_03974 | ALC56_14051 | A0A151JYS6 | A0A151JTU0 | AP-1 complex subunit gamma. | AP-2 complex subunit alpha; Adaptins are components of the adapter complexes which link clathrin to receptors in coated vesicles. | 0.552 |
ALC56_04666 | ALC56_02953 | A0A151JYC7 | A0A195FQ64 | Transmembrane emp24 domain-containing protein 7. | Ubiquilin-1. | 0.458 |
ALC56_04666 | ALC56_05449 | A0A151JYC7 | A0A195FKI0 | Transmembrane emp24 domain-containing protein 7. | Facilitated trehalose transporter Tret1. | 0.471 |
ALC56_04666 | ALC56_06222 | A0A151JYC7 | A0A151JX31 | Transmembrane emp24 domain-containing protein 7. | Putative ATP-dependent RNA helicase DHX34. | 0.916 |
ALC56_04666 | ALC56_10457 | A0A151JYC7 | A0A195F533 | Transmembrane emp24 domain-containing protein 7. | 39S ribosomal protein L15, mitochondrial. | 0.937 |
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