STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_03795Protein msta, isoform B. (449 aa)    
Predicted Functional Partners:
ALC56_00841
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
   
 0.870
ALC56_05045
Histone-lysine N-methyltransferase ash1.
     
 0.861
ALC56_01515
Histone-lysine N-methyltransferase pr-set7.
    
 0.861
ALC56_11032
Protein msta, isoform A.
  
  
 
0.859
ALC56_01830
Calmodulin-lysine N-methyltransferase.
     
 0.849
ALC56_07807
Histone-lysine N-methyltransferase MLL5.
   
 
  0.846
ALC56_12747
SET and MYND domain-containing protein 4.
     
 0.825
ALC56_02471
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
    
 0.790
ALC56_09191
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.787
ALC56_06438
SET and MYND domain-containing protein 3.
     
 0.741
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.