STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_02104tRNA-specific adenosine deaminase 2. (160 aa)    
Predicted Functional Partners:
ALC56_03370
tRNA-specific adenosine deaminase-like protein 3.
   
 0.986
ALC56_07394
Thymidylate synthase.
  
 
 0.903
ALC56_15245
Uracil phosphoribosyltransferase like protein.
   
 0.876
ALC56_05432
Alcohol dehydrogenase class-3.
  
 
  0.841
ALC56_09659
Thymidylate kinase.
  
 
 0.829
ALC56_06553
Ribokinase; Belongs to the carbohydrate kinase PfkB family.
    
 0.796
ALC56_12803
Uridine phosphorylase 1.
     
 0.792
ALC56_12749
5'-nucleotidase; Belongs to the 5'-nucleotidase family.
    
 0.789
ALC56_12748
Protein 5NUC; Belongs to the 5'-nucleotidase family.
    
 0.789
ALC56_05574
Purine nucleoside phosphorylase.
    
 0.779
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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