STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_02784L-allo-threonine aldolase. (365 aa)    
Predicted Functional Partners:
ALC56_12114
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
   
 0.950
ALC56_07795
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
    
 0.942
ALC56_11471
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.931
ALC56_10844
Uncharacterized protein.
  
 
 0.924
ALC56_00746
Dihydrolipoyl dehydrogenase.
    
 0.924
ALC56_06888
Phosphoserine phosphatase.
    
 0.917
ALC56_08752
Sarcosine dehydrogenase, mitochondrial.
   
 0.911
ALC56_01327
Putative hydroxyacid-oxoacid transhydrogenase, mitochondrial.
    
 0.903
ALC56_05407
Thioredoxin reductase 1, mitochondrial; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
    
 0.897
ALC56_03354
L-threonine 3-dehydrogenase, mitochondrial.
    
 0.894
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.