STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_02247Glucose dehydrogenase [acceptor]. (622 aa)    
Predicted Functional Partners:
ALC56_07204
Intraflagellar transport protein 52 like protein.
    
 0.885
ALC56_03624
Tetratricopeptide repeat protein 26.
    
 0.881
ALC56_08738
Tetratricopeptide repeat protein 30A.
    
 0.880
ALC56_04105
Intraflagellar transport protein 81 like protein.
    
 0.879
ALC56_04893
Intraflagellar transport protein 57 like protein.
    
 0.877
ALC56_02025
Intraflagellar transport protein 88 like protein.
    
 0.877
ALC56_08214
Eukaryotic translation initiation factor 3 subunit B; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
    
 0.872
ALC56_13648
Intraflagellar transport protein 80 like protein.
    
 0.872
ALC56_08400
Clusterin-associated protein 1.
    
 0.870
ALC56_10980
TRAF3-interacting protein 1.
    
 0.842
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.