STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_00968Transient receptor potential protein; Belongs to the transient receptor (TC 1.A.4) family. (1150 aa)    
Predicted Functional Partners:
ALC56_08832
Multiple PDZ domain protein.
   
 0.998
ALC56_05264
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 0.961
ALC56_10803
Transient receptor potential-gamma protein; Belongs to the transient receptor (TC 1.A.4) family.
  
 
0.927
ALC56_07227
Transient-receptor-potential-like protein; Belongs to the transient receptor (TC 1.A.4) family.
  
 
0.856
ALC56_06530
Short transient receptor potential channel 5; Belongs to the transient receptor (TC 1.A.4) family.
  
  
 
0.853
ALC56_11317
Arrestin like protein.
   
 
 0.841
ALC56_07567
Mothers against decapentaplegic homolog.
    
 0.807
ALC56_05850
Mothers against decapentaplegic homolog.
    
 0.807
ALC56_14916
Mothers against decapentaplegic homolog.
    
 0.807
ALC56_11477
Mothers against decapentaplegic homolog.
    
 0.807
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.