STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_01039Peptidylprolyl isomerase-like 5. (418 aa)    
Predicted Functional Partners:
ALC56_12156
Cullin-2; Belongs to the cullin family.
    
 0.973
ALC56_09783
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 0.964
ALC56_11218
RING-box protein 1A.
    
 0.962
ALC56_12737
Calcium homeostasis endoplasmic reticulum protein.
    
 0.875
ALC56_06456
Transcription elongation factor B polypeptide 2.
    
 0.873
ALC56_05664
Transcription elongation factor B polypeptide 2.
    
 0.873
MCM7
DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]
   
 
 0.810
ALC56_07296
WD repeat and HMG-box DNA-binding protein 1.
   
 
 0.801
ALC56_11936
DNA helicase.
   
 
 0.775
ALC56_11552
Claspin like protein.
   
 
 0.748
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.