STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_00476Actin-binding protein IPP. (603 aa)    
Predicted Functional Partners:
ALC56_12435
Cullin-3; Belongs to the cullin family.
    
 0.978
ALC56_11278
Radial spoke head protein 3 like protein.
   
 
 0.942
ALC56_00355
Myosin light chain kinase, smooth muscle.
    
 
 0.942
ALC56_05043
Mitotic spindle assembly checkpoint protein MAD2B.
    
   0.941
ALC56_12083
Cullin-1; Belongs to the cullin family.
    
 0.901
ALC56_05763
Segment polarity protein dishevelled like protein DVL-3.
    
 0.889
ALC56_05267
Protein PTHB1.
    
 0.889
ALC56_13055
Tetratricopeptide repeat protein 8.
    
 0.868
ALC56_06956
E3 ubiquitin-protein ligase MIB2.
    
 0.816
ALC56_10441
E3 ubiquitin-protein ligase mind-bomb.
    
 0.816
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.