STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_00453Ubiquitin-like protein 7. (369 aa)    
Predicted Functional Partners:
ALC56_07357
UBX domain-containing protein 7.
    
 0.991
ALC56_05595
26S proteasome non-ATPase regulatory subunit 4.
   
 0.985
ALC56_01898
Ubiquitin-60S ribosomal protein L40.
   
 0.981
ALC56_00721
26S proteasome non-ATPase regulatory subunit 13.
   
 0.979
ALC56_08892
Putative E3 ubiquitin-protein ligase TRIP12.
   
 0.977
ALC56_06222
Putative ATP-dependent RNA helicase DHX34.
   
 0.968
ALC56_08587
Intersectin-1.
    
 0.967
ALC56_02936
Katanin p60 ATPase-containing subunit A-like 2; Belongs to the AAA ATPase family.
   
 0.967
ALC56_11818
Ubiquitin-40S ribosomal protein S27a.
    
 0.965
ALC56_06386
26S protease regulatory subunit 7; Belongs to the AAA ATPase family.
   
 0.964
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.