STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_0079939S ribosomal protein L47, mitochondrial. (268 aa)    
Predicted Functional Partners:
ALC56_11141
39S ribosomal protein L17, mitochondrial.
   
 
 0.998
ALC56_00054
39S ribosomal protein L23, mitochondrial.
   
 
 0.997
ALC56_14266
39S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.997
ALC56_06134
39S ribosomal protein L21, mitochondrial.
   
 
 0.997
ALC56_09675
39S ribosomal protein L30, mitochondrial.
   
   0.996
ALC56_07642
39S ribosomal protein L19, mitochondrial.
   
 
 0.996
ALC56_14520
28S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.994
ALC56_11691
39S ribosomal protein L46, mitochondrial.
   
 
 0.994
ALC56_10640
39S ribosomal protein L13, mitochondrial.
   
 
 0.994
ALC56_02081
39S ribosomal protein L4, mitochondrial.
   
 
 0.994
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.