Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALC56_00363 | ALC56_00621 | A0A195FXF0 | A0A195FYR3 | Mitochondrial import receptor subunit TOM40 like protein 1. | Uncharacterized protein. | 0.629 |
ALC56_00621 | ALC56_00363 | A0A195FYR3 | A0A195FXF0 | Uncharacterized protein. | Mitochondrial import receptor subunit TOM40 like protein 1. | 0.629 |
ALC56_00621 | ALC56_01898 | A0A195FYR3 | A0A195FT85 | Uncharacterized protein. | Ubiquitin-60S ribosomal protein L40. | 0.687 |
ALC56_00621 | ALC56_01926 | A0A195FYR3 | A0A195FUW4 | Uncharacterized protein. | LYR motif-containing protein 4; Belongs to the complex I LYR family. | 0.659 |
ALC56_00621 | ALC56_02044 | A0A195FYR3 | A0A195FTM8 | Uncharacterized protein. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.644 |
ALC56_00621 | ALC56_03544 | A0A195FYR3 | A0A195FNH8 | Uncharacterized protein. | 26S proteasome non-ATPase regulatory subunit 14. | 0.628 |
ALC56_00621 | ALC56_04898 | A0A195FYR3 | A0A195FKR7 | Uncharacterized protein. | Mitochondrial import receptor subunit TOM40 like protein 1. | 0.629 |
ALC56_00621 | ALC56_06548 | A0A195FYR3 | A0A195FFX0 | Uncharacterized protein. | BRCA1-A complex subunit MERIT40. | 0.727 |
ALC56_00621 | ALC56_08273 | A0A195FYR3 | A0A151JUZ8 | Uncharacterized protein. | 60S ribosomal protein L21. | 0.644 |
ALC56_00621 | ALC56_09622 | A0A195FYR3 | A0A195F667 | Uncharacterized protein. | BRCA1-associated RING domain protein 1. | 0.837 |
ALC56_00621 | ALC56_11898 | A0A195FYR3 | A0A195F0Z0 | Uncharacterized protein. | Lys-63-specific deubiquitinase BRCC36. | 0.628 |
ALC56_01898 | ALC56_00621 | A0A195FT85 | A0A195FYR3 | Ubiquitin-60S ribosomal protein L40. | Uncharacterized protein. | 0.687 |
ALC56_01898 | ALC56_02044 | A0A195FT85 | A0A195FTM8 | Ubiquitin-60S ribosomal protein L40. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.661 |
ALC56_01898 | ALC56_03544 | A0A195FT85 | A0A195FNH8 | Ubiquitin-60S ribosomal protein L40. | 26S proteasome non-ATPase regulatory subunit 14. | 0.976 |
ALC56_01898 | ALC56_08273 | A0A195FT85 | A0A151JUZ8 | Ubiquitin-60S ribosomal protein L40. | 60S ribosomal protein L21. | 0.999 |
ALC56_01898 | ALC56_09622 | A0A195FT85 | A0A195F667 | Ubiquitin-60S ribosomal protein L40. | BRCA1-associated RING domain protein 1. | 0.995 |
ALC56_01898 | ALC56_11898 | A0A195FT85 | A0A195F0Z0 | Ubiquitin-60S ribosomal protein L40. | Lys-63-specific deubiquitinase BRCC36. | 0.952 |
ALC56_01926 | ALC56_00621 | A0A195FUW4 | A0A195FYR3 | LYR motif-containing protein 4; Belongs to the complex I LYR family. | Uncharacterized protein. | 0.659 |
ALC56_01926 | ALC56_02044 | A0A195FUW4 | A0A195FTM8 | LYR motif-containing protein 4; Belongs to the complex I LYR family. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.939 |
ALC56_01926 | ALC56_09622 | A0A195FUW4 | A0A195F667 | LYR motif-containing protein 4; Belongs to the complex I LYR family. | BRCA1-associated RING domain protein 1. | 0.516 |
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