STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
arcBOrnithine carbamoyltransferase, catabolic. (347 aa)    
Predicted Functional Partners:
arcA
Arginine deiminase.
 
 
 0.998
arcC
Carbamate kinase; Belongs to the carbamate kinase family.
  
 
 0.996
metG
Methionyl-tRNA synthetase (Methionine-tRNAligase, MetRS).
     
 0.549
pheT
Phenylalanyl-tRNA synthetase beta chain (PheT); Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.496
mscL
Large-conductance mechanosensitive channel.
       0.459
MHO_2540
N-dimethylarginine dimethylaminohydrolase.
     
 0.444
MHO_5040
Conserved hypothetical protein, putative aminoacid permease.
  
  
 0.422
MHO_5090
Xaa-His dipeptidase.
  
  
 0.415
Your Current Organism:
Mycoplasma hominis
NCBI taxonomy Id: 347256
Other names: M. hominis ATCC 23114, Mycoplasma hominis ATCC 23114, Mycoplasma hominis PG21, Mycoplasma hominis str. ATCC 23114, Mycoplasma hominis strain ATCC 23114
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.