Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
oppDOligopeptide transport ATP-binding proteinhomolog; Belongs to the ABC transporter superfamily. (388 aa)    
Predicted Functional Partners:
oppB
Oligopeptide transport system permease protein.
 0.999
oppC
Oligopeptide transport system permease protein.
 0.999
oppC-2
Oligopeptide transport system permease protein.
 
 0.997
oppF
Oligopeptide transport ATP-binding proteinhomolog; Belongs to the ABC transporter superfamily.
 
 
0.993
oppB-2
Oligopeptide transport system permease protein.
 
 0.988
MHO_4360
ABC transporter ATP-binding protein.
     
0.905
bcrA
ABC transporter ATP-binding protein.
     
0.902
phnC
Phosphonates import ATP-binding protein phnC.
 
     
0.900
potA
Spermidine/putrescine ABC transporterATP-binding protein potA; Belongs to the ABC transporter superfamily.
 
     
0.900
cbiO2
Cobalt import ATP-binding protein cbiO 2; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
     
0.899
Your Current Organism:
Mycoplasma hominis
NCBI taxonomy Id: 347256
Other names: M. hominis ATCC 23114, Mycoplasma hominis ATCC 23114, Mycoplasma hominis PG21, Mycoplasma hominis str. ATCC 23114, Mycoplasma hominis strain ATCC 23114
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