STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdM-2Pseudogene of Type I restriction enzyme mprotein (N-terminal part). (388 aa)    
Predicted Functional Partners:
hsdS-2
Type I restriction enzyme specificity protein.
 
 
 0.973
hsdM
Pseudogene of Type I restriction enzyme mprotein (C-terminal part).
      0.972
hsdS
Type I restriction enzyme specificity protein.
 
 
 0.961
hsdR
Type I restriction-modification systemendonuclease; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 
 0.935
hsdS-3
Type I restriction enzyme specificity protein.
 
 
 0.909
hsdS-4
Type I restriction enzyme specificity protein.
  
 
 0.846
uvrB
UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...]
   
   0.548
dcm
Cytosine-specific DNA methyltransferase/Type II site-specific deoxyribonuclease.
  
 
 0.463
MHO_3260
Conserved hypothetical protein, putativeThiJ/PfpI family protein.
       0.449
Your Current Organism:
Mycoplasma hominis
NCBI taxonomy Id: 347256
Other names: M. hominis ATCC 23114, Mycoplasma hominis ATCC 23114, Mycoplasma hominis PG21, Mycoplasma hominis str. ATCC 23114, Mycoplasma hominis strain ATCC 23114
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.