Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
phnCPhosphonates import ATP-binding protein phnC. (247 aa)    
Predicted Functional Partners:
MHO_3630
ABC transporter permease protein.
 
 
 0.978
oppD
Oligopeptide transport ATP-binding proteinhomolog; Belongs to the ABC transporter superfamily.
 
     
0.900
MHO_3610
P37-like (Mycoplasma hyorhinis) ABC transportersubstrate-binding lipoprotein.
    
  0.872
MHO_3620
P37-like (Mycoplasma hyorhinis) ABC transportersubstrate-binding lipoprotein.
    
  0.853
MHO_4360
ABC transporter ATP-binding protein.
    
0.787
oppF
Oligopeptide transport ATP-binding proteinhomolog; Belongs to the ABC transporter superfamily.
 
     0.746
cbiO1
Cobalt import ATP-binding protein cbiO 1; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
    
0.653
ldh
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
     
 0.552
pgi
Glucose-6-phosphate isomerase (GPI).
       0.537
rpsA
30S ribosomal protein S1.
       0.537
Your Current Organism:
Mycoplasma hominis
NCBI taxonomy Id: 347256
Other names: M. hominis ATCC 23114, Mycoplasma hominis ATCC 23114, Mycoplasma hominis PG21, Mycoplasma hominis str. ATCC 23114, Mycoplasma hominis strain ATCC 23114
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