Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
potASpermidine/putrescine ABC transporterATP-binding protein potA; Belongs to the ABC transporter superfamily. (469 aa)    
Predicted Functional Partners:
potB
Spermidine/putrescine ABC transporter permeaseprotein potB.
 0.999
potC
Spermidine/putrescine ABC transporter permeaseprotein potC.
 
 0.998
MHO_4480
Conserved hypothetical protein.
  
 0.981
MHO_4440
Conserved hypothetical protein.
  
 0.966
oppD
Oligopeptide transport ATP-binding proteinhomolog; Belongs to the ABC transporter superfamily.
 
     
0.900
era
GTP-binding protein era homolog; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
       0.684
ybeY
Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
       0.658
MHO_2010
Conserved hypothetical protein.
     
 0.570
MHO_4410
ABC transporter ATP-binding protein.
       0.515
MHO_4500
Glycosyltransferase.
       0.496
Your Current Organism:
Mycoplasma hominis
NCBI taxonomy Id: 347256
Other names: M. hominis ATCC 23114, Mycoplasma hominis ATCC 23114, Mycoplasma hominis PG21, Mycoplasma hominis str. ATCC 23114, Mycoplasma hominis strain ATCC 23114
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