STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rpeRibulose-phosphate 3-epimerase. (215 aa)    
Predicted Functional Partners:
engC
Probable GTPase engC; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
 
  
 0.981
tktA
Transketolase.
 
 0.979
rpiB
Ribose-5-phosphate isomerase.
  
 
 0.979
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
  
 
 0.848
sps1
Serine/threonine protein kinase.
 
    0.825
MHO_4870
Protein phosphatase.
  
    0.820
MHO_4910
Hypothetical protein, predicted lipoprotein.
       0.773
prs
Ribose-phosphate pyrophosphokinase.
  
  
 0.755
MHO_4850
DNA methylase.
  
    0.692
pgi
Glucose-6-phosphate isomerase (GPI).
     
 0.619
Your Current Organism:
Mycoplasma hominis
NCBI taxonomy Id: 347256
Other names: M. hominis ATCC 23114, Mycoplasma hominis ATCC 23114, Mycoplasma hominis PG21, Mycoplasma hominis str. ATCC 23114, Mycoplasma hominis strain ATCC 23114
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.