Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hsdS-3Type I restriction enzyme specificity protein. (393 aa)    
Predicted Functional Partners:
hsdM-3
Type I restriction enzyme M protein.
 
 
 0.972
hsdM-2
Pseudogene of Type I restriction enzyme mprotein (N-terminal part).
 
 
 0.906
hsdM
Pseudogene of Type I restriction enzyme mprotein (C-terminal part).
 
 
 0.899
hsdR
Type I restriction-modification systemendonuclease; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
  
 0.740
hsdS-4
Type I restriction enzyme specificity protein.
 
    
0.651
MHO_5200
Conserved hypothetical protein, putative RNAbinding protein.
  
    0.527
MHO_5260
Hypothetical protein.
 
     0.460
infB
Translation initiation factor if-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
   
   0.453
gidA
Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
   
   0.412
Your Current Organism:
Mycoplasma hominis
NCBI taxonomy Id: 347256
Other names: M. hominis ATCC 23114, Mycoplasma hominis ATCC 23114, Mycoplasma hominis PG21, Mycoplasma hominis str. ATCC 23114, Mycoplasma hominis strain ATCC 23114
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