STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAG0060Lipoate protein ligase A, truncated in C terminal. (234 aa)    
Predicted Functional Partners:
gcdH
Glycine cleavage system H protein.
 
 
 0.902
pdhC
Dihydrolipoamide acetyltransferase component ofpyruvate deshydrogenase complex.
  
 0.647
MAG4910
Hypothetical protein.
  
 0.637
gcdH-2
Glycine cleavage system H protein.
   
 0.630
MAG0080
Conserved hypothetical protein.
       0.615
MAG0100
Conserved hypothetical protein.
       0.615
lplA
Lipoate protein ligase A.
 
    
0.580
MAG0050
NADH dependent flavin oxidoreductase.
       0.454
MAG0110
Hypothetical protein.
       0.412
mraW
S adenosyl methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
  
   0.402
Your Current Organism:
Mycoplasma agalactiae PG2
NCBI taxonomy Id: 347257
Other names: M. agalactiae PG2, Mycoplasma agalactiae str. PG2, Mycoplasma agalactiae strain PG2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.