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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gcdHGlycine cleavage system H protein. (114 aa)    
Predicted Functional Partners:
pdhD
Dihydrolipoamide dehydrogenase (E3 component ofpyruvate complex).
    
 0.985
lplA
Lipoate protein ligase A.
 
 
 0.956
glyA
Serine hydroxymethyltransferase (Serinemethylase) (SHMT); Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
  
 
 0.938
MAG0060
Lipoate protein ligase A, truncated in C terminal.
 
 
 0.920
MAG7330
Acyl carrier protein homolog.
  
 0.870
MAG0080
Conserved hypothetical protein.
 
     0.867
pdhB
Pyruvate dehydrogenase E1 component, betasubunit.
   
 
 0.852
MAG0100
Conserved hypothetical protein.
     
 0.822
pdhA
Pyruvate dehydrogenase E1 component, alphasubunit.
    
 0.818
prs
Ribose phosphate pyrophosphokinase(Phosphoribosyl pyrophosphate synthetase).
    
  0.811
Your Current Organism:
Mycoplasma agalactiae PG2
NCBI taxonomy Id: 347257
Other names: M. agalactiae PG2, Mycoplasma agalactiae str. PG2, Mycoplasma agalactiae strain PG2
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