STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dgkDeoxyguanosine kinase. (220 aa)    
Predicted Functional Partners:
MAG7330
Acyl carrier protein homolog.
   
 0.877
dgk-2
Deoxyguanosine kinase.
 
    
0.820
pyk
Pyruvate kinase (PK); Belongs to the pyruvate kinase family.
   
  
 0.590
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
  
 
 0.588
MAG5890
Aminopeptidase; Belongs to the peptidase M17 family.
   
  0.571
pepA
Aminopeptidase (Leucine aminopeptidase); Belongs to the peptidase M17 family.
   
  0.571
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
 0.562
cdd
Cytidine deaminase (Cytidine aminohydrolase); This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
    
 0.528
MAG7360
Conserved hypothetical protein.
 
     0.502
MAG0150
Sugar ABC transporter Permease; Belongs to the binding-protein-dependent transport system permease family.
  
    0.464
Your Current Organism:
Mycoplasma agalactiae PG2
NCBI taxonomy Id: 347257
Other names: M. agalactiae PG2, Mycoplasma agalactiae str. PG2, Mycoplasma agalactiae strain PG2
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