STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psuGConserved hypothetical protein YeiN; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family. (301 aa)    
Predicted Functional Partners:
MAG0260
Conserved hypothetical protein YeiC.
 
 
 0.995
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
    
  0.908
deoA
Thymidine phosphorylase (TDRPASE).
    
  0.903
deoD
Purine nucleoside phosphorylase (Inosinephosphorylase) (PNP).
    
  0.900
deoD-2
Purine nucleoside phosphorylase (Inosinephosphorylase).
    
  0.900
MAG1670
Conserved hypothetical protein, predicted lipoprotein.
      
 0.530
MAG2340
Conserved hypothetical protein.
      
 0.525
MAG0270
Hydrolase of the HAD superfamily.
       0.517
MAG0240
Hypothetical protein, predicted lipoprotein.
       0.469
MAG0280
Conserved hypothetical protein.
       0.439
Your Current Organism:
Mycoplasma agalactiae PG2
NCBI taxonomy Id: 347257
Other names: M. agalactiae PG2, Mycoplasma agalactiae str. PG2, Mycoplasma agalactiae strain PG2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.