STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppDOligopeptide ABC transporter, ATP bindingprotein (OppD); Belongs to the ABC transporter superfamily. (529 aa)    
Predicted Functional Partners:
oppC
Oligopeptide ABC transporter, permease protein(OppC).
 
 0.999
oppB
Oligopeptide ABC transporter, permeaseprotein(OppB).
 0.998
oppA
Oligopeptide ABC transporter, substrate bindingprotein (OppA), predicted lipoprotein.
 
 
 0.996
oppF
Oligopeptide ABC transporter, ATP bindingprotein (OppF); Belongs to the ABC transporter superfamily.
 
 
0.993
oppC-2
Oligopeptide ABC transporter system, permeaseprotein (OppC).
 
 0.993
oppB-2
Oligopeptide ABC transporter, permease protein(OppB).
 0.983
oppF-2
Oligopeptide ABC transporter, ATP bindingprotein (OppF); Belongs to the ABC transporter superfamily.
 
 
0.965
oppB-3
Oligopeptide transport system permease protein(OppB).
  
 0.950
oppD-2
Oligopeptide ABC transporter, ATP bindingprotein (OppD); Belongs to the ABC transporter superfamily.
  
  
 
0.913
MAG1630
ABC transporter, ATP binding protein.
     
0.902
Your Current Organism:
Mycoplasma agalactiae PG2
NCBI taxonomy Id: 347257
Other names: M. agalactiae PG2, Mycoplasma agalactiae str. PG2, Mycoplasma agalactiae strain PG2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.