STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepFOligoendopeptidase F. (612 aa)    
Predicted Functional Partners:
pepP
XAA PRO aminopeptidase.
     
 0.747
rpmJ
50S ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
     
 0.541
lon
Heat shock ATP dependent protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner (By similarity).
  
  
 0.525
potC
Spermidine/putrescine ABC transporter permeaseprotein PotC.
  
    0.485
rpsN
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
     
 0.482
potB
Spermidine/putrescine ABC transporter permeaseprotein PotB.
  
    0.474
potA
Spermidine/putrescine ABC transporterATP binding protein PotA; Belongs to the ABC transporter superfamily.
       0.471
MAG5890
Aminopeptidase; Belongs to the peptidase M17 family.
     
 0.455
pepA
Aminopeptidase (Leucine aminopeptidase); Belongs to the peptidase M17 family.
     
 0.455
MAG1280
Conserved hypothetical protein.
       0.449
Your Current Organism:
Mycoplasma agalactiae PG2
NCBI taxonomy Id: 347257
Other names: M. agalactiae PG2, Mycoplasma agalactiae str. PG2, Mycoplasma agalactiae strain PG2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.