STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
potCSpermidine/putrescine ABC transporter permeaseprotein PotC. (297 aa)    
Predicted Functional Partners:
potB
Spermidine/putrescine ABC transporter permeaseprotein PotB.
 
 0.999
MAG1280
Conserved hypothetical protein.
  
 0.999
potA
Spermidine/putrescine ABC transporterATP binding protein PotA; Belongs to the ABC transporter superfamily.
 
  
 0.996
lplA
Lipoate protein ligase A.
     
 0.568
lplA-2
Lipoate protein ligase A.
     
 0.568
rpmF
50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.
  
    0.506
MAG0480
Conserved hypothetical protein.
     
 0.500
pepF
Oligoendopeptidase F.
  
    0.488
thiI
Thiamine biosynthesis protein thiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
  
    0.406
Your Current Organism:
Mycoplasma agalactiae PG2
NCBI taxonomy Id: 347257
Other names: M. agalactiae PG2, Mycoplasma agalactiae str. PG2, Mycoplasma agalactiae strain PG2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.