Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lspLipoprotein signal peptidase (SPASE II); Belongs to the peptidase A8 family. (243 aa)    
Predicted Functional Partners:
secD
Protein export membrane protein.
 
  
 0.926
ileS
Isoleucyl tRNA synthetase (Isoleucine tRNAligase); Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.
  
  
 0.883
MAG4430
Conserved hypothetical protein; Involved in DNA repair and RecF pathway recombination.
 
   
 0.787
MAG1000
Conserved hypothetical protein, predictedlipoprotein.
 
    0.783
MAG7140
Conserved hypothetical protein.
  
    0.778
MAG1280
Conserved hypothetical protein.
  
     0.774
MAG4660
Conserved hypothetical protein.
  
     0.774
MAG4370
ABC transporter permease protein.
 
     0.772
MAG5040
Conserved hypothetical protein, predicted lipoprotein.
 
     0.768
MAG6220
Conserved hypothetical protein.
  
     0.767
Your Current Organism:
Mycoplasma agalactiae PG2
NCBI taxonomy Id: 347257
Other names: M. agalactiae PG2, Mycoplasma agalactiae str. PG2, Mycoplasma agalactiae strain PG2
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