STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
deoBPhosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. (395 aa)    
Predicted Functional Partners:
deoC
Deoxyribose phosphate aldolase(Phosphodeoxyriboaldolase) (Deoxyriboaldolase); Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
 
 
 0.994
tkt
Transketolase I; Belongs to the transketolase family.
   
 
 0.954
deoA
Thymidine phosphorylase (TDRPASE).
  
 
 0.918
prs
Ribose phosphate pyrophosphokinase(Phosphoribosyl pyrophosphate synthetase).
    
 0.914
MAG1110
Ribose 5 phosphate isomerase.
    
 0.911
deoD-2
Purine nucleoside phosphorylase (Inosinephosphorylase).
 
 
 0.824
deoD
Purine nucleoside phosphorylase (Inosinephosphorylase) (PNP).
 
 
 0.796
pyrG
CTP synthase (UTP ammonia ligase); Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
     
 0.744
rpe
Ribulose phosphate 3 epimerase(Pentose 5 phosphate 3 epimerase).
      
 0.614
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
      
 0.601
Your Current Organism:
Mycoplasma agalactiae PG2
NCBI taxonomy Id: 347257
Other names: M. agalactiae PG2, Mycoplasma agalactiae str. PG2, Mycoplasma agalactiae strain PG2
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