STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
deoBPhosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. (395 aa)    
Predicted Functional Partners:
deoC
Deoxyribose phosphate aldolase(Phosphodeoxyriboaldolase) (Deoxyriboaldolase); Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
 
 
 0.994
tkt
Transketolase I; Belongs to the transketolase family.
     
 0.949
deoA
Thymidine phosphorylase (TDRPASE).
  
 
 0.931
MAG1110
Ribose 5 phosphate isomerase.
    
 0.923
prs
Ribose phosphate pyrophosphokinase(Phosphoribosyl pyrophosphate synthetase).
    
 0.914
MAG4650
Phosphomannomutase.
    
 0.913
deoD-2
Purine nucleoside phosphorylase (Inosinephosphorylase).
 
 
 0.781
deoD
Purine nucleoside phosphorylase (Inosinephosphorylase) (PNP).
 
 
 0.746
rpe
Ribulose phosphate 3 epimerase(Pentose 5 phosphate 3 epimerase).
      
 0.718
pyrG
CTP synthase (UTP ammonia ligase); Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
     
 0.703
Your Current Organism:
Mycoplasma agalactiae PG2
NCBI taxonomy Id: 347257
Other names: M. agalactiae PG2, Mycoplasma agalactiae str. PG2, Mycoplasma agalactiae strain PG2
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