STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
licALicA. (252 aa)    
Predicted Functional Partners:
MAG4780
ATP binding protein.
 
    0.786
MAG2900
Conserved hypothetical protein.
 
    0.762
chrA
Chromate transport protein.
  
     0.750
MAG6220
Conserved hypothetical protein.
  
     0.735
nusB
Transcription termination factor (NusB).
  
     0.673
MAG7030
Conserved hypothetical protein.
  
     0.669
MAG2890
Conserved hypothetical protein.
  
     0.630
MAG2920
Conserved hypothetical protein, predicted transmembrane protein.
  
     0.618
MAG4660
Conserved hypothetical protein.
  
     0.616
MAG4790
Hypothetical protein.
       0.596
Your Current Organism:
Mycoplasma agalactiae PG2
NCBI taxonomy Id: 347257
Other names: M. agalactiae PG2, Mycoplasma agalactiae str. PG2, Mycoplasma agalactiae strain PG2
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