STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAG4830NADPH flavin oxidoreductase; Belongs to the flavin oxidoreductase frp family. (243 aa)    
Predicted Functional Partners:
ribF
Riboflavin biosynthesis protein.
    
 0.921
MAG4840
Pseudogene of Triacylglycerol lipase(N terminal part).
  
    0.573
MAG4820
Conserved hypothetical protein.
     
 0.552
MAG1640
Conserved hypothetical protein predicted membrane protein.
  
  
 0.528
MAG4600
ABC transporter, permease protein.
  
  
 0.528
secD
Protein export membrane protein.
     
 0.496
MAG4850
Pseudogene of Triacylglycerol lipase(C terminal part).
  
    0.488
lepA
GTP binding protein (LepA); Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
       0.414
trxB
Thioredoxin reductase.
  
 
 0.402
Your Current Organism:
Mycoplasma agalactiae PG2
NCBI taxonomy Id: 347257
Other names: M. agalactiae PG2, Mycoplasma agalactiae str. PG2, Mycoplasma agalactiae strain PG2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.