STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ldhL lactate dehydrogenase (L LDH); Belongs to the LDH/MDH superfamily. (323 aa)    
Predicted Functional Partners:
pdhB
Pyruvate dehydrogenase E1 component, betasubunit.
  
 0.990
pyk
Pyruvate kinase (PK); Belongs to the pyruvate kinase family.
  
 0.972
pdhA
Pyruvate dehydrogenase E1 component, alphasubunit.
  
 
 0.956
pgiB
Glucose 6 phosphate isomerase; Belongs to the GPI family.
  
 0.885
pgiB-2
Glucose 6 phosphate isomerase.
  
 0.881
tkt
Transketolase I; Belongs to the transketolase family.
  
 0.862
fba
Fructose bisphosphate aldolase (Fba).
   
 
 0.858
lon
Heat shock ATP dependent protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner (By similarity).
  
  0.846
atpA
ATP synthase alpha chain.
  
 0.845
atpA-2
ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.
  
 0.845
Your Current Organism:
Mycoplasma agalactiae PG2
NCBI taxonomy Id: 347257
Other names: M. agalactiae PG2, Mycoplasma agalactiae str. PG2, Mycoplasma agalactiae strain PG2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.