STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAG5480Pseudogene of RecU (C terminal part). (91 aa)    
Predicted Functional Partners:
MAG5490
Pseudogene of RecU (N terminal part).
      0.944
lsp
Lipoprotein signal peptidase (SPASE II); Belongs to the peptidase A8 family.
  
   
 0.740
MAG1970
Conserved hypothetical protein.
  
     0.665
MAG6220
Conserved hypothetical protein.
 
   
 0.656
MAG4660
Conserved hypothetical protein.
  
     0.640
recA
RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
     
 0.601
secD
Protein export membrane protein.
 
   
 0.595
MAG4780
ATP binding protein.
 
    0.545
licA
LicA.
  
     0.531
MAG5040
Conserved hypothetical protein, predicted lipoprotein.
  
     0.528
Your Current Organism:
Mycoplasma agalactiae PG2
NCBI taxonomy Id: 347257
Other names: M. agalactiae PG2, Mycoplasma agalactiae str. PG2, Mycoplasma agalactiae strain PG2
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.