STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdS-2Restriction modification system specificitysubunit HsdS. (183 aa)    
Predicted Functional Partners:
hsdM-2
Modification (Methylase) protein of type Irestriction modification system HsdM.
  
 
 0.989
hsdM
Modification (Methylase) protein of type Irestriction modification system.
  
 
 0.956
MAG5710
Pseudogene HsdR (N terminal part).
 
  
 0.932
MAG5700
Pseudogene HsdR (C terminal part).
  
  
 0.922
MAG5680
Hypothetical protein.
 
   
0.588
MAG5660
Conserved hypothetical protein.
     
 0.426
MAG5670
Conserved hypothetical protein, truncated in N terminal.
     
 0.426
atpF
ATP synthase B chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 
 0.424
polA
DNA polymerase I: 5' 3' exonuclease domain.
   
 
 0.423
MAG5690
Phage family integrase; Belongs to the 'phage' integrase family.
     
 0.401
Your Current Organism:
Mycoplasma agalactiae PG2
NCBI taxonomy Id: 347257
Other names: M. agalactiae PG2, Mycoplasma agalactiae str. PG2, Mycoplasma agalactiae strain PG2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.