STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdM-2Modification (Methylase) protein of type Irestriction modification system HsdM. (892 aa)    
Predicted Functional Partners:
MAG5700
Pseudogene HsdR (C terminal part).
 
 0.996
MAG5710
Pseudogene HsdR (N terminal part).
 
 0.996
hsdS-2
Restriction modification system specificitysubunit HsdS.
  
 
 0.995
MAG5680
Hypothetical protein.
  
 
 0.980
hsdM
Modification (Methylase) protein of type Irestriction modification system.
 
  
 
0.901
MAG5690
Phage family integrase; Belongs to the 'phage' integrase family.
     
 0.593
hsdS
Type I R/M system specificity subunit.
      
 0.530
MAG5660
Conserved hypothetical protein.
     
 0.500
MAG5670
Conserved hypothetical protein, truncated in N terminal.
     
 0.500
uvrB
UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...]
   
 
 0.440
Your Current Organism:
Mycoplasma agalactiae PG2
NCBI taxonomy Id: 347257
Other names: M. agalactiae PG2, Mycoplasma agalactiae str. PG2, Mycoplasma agalactiae strain PG2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.