STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chrA-2Chromate transport protein. (217 aa)    
Predicted Functional Partners:
chrA
Chromate transport protein.
 
     0.952
trmB
tRNA (guanine N(7)) methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
       0.773
MAG6750
Ribosomal large subunit pseudouridine synthaseD; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
       0.671
MAG6790
Conserved hypothetical protein.
       0.610
MAG6740
Conserved hypothetical protein.
       0.550
lplA
Lipoate protein ligase A.
     
 0.545
lplA-2
Lipoate protein ligase A.
     
 0.545
licA
LicA.
  
     0.509
rnhB-2
Ribonuclease H II; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.508
uhpT
Hexosephosphate transport protein.
 
     0.505
Your Current Organism:
Mycoplasma agalactiae PG2
NCBI taxonomy Id: 347257
Other names: M. agalactiae PG2, Mycoplasma agalactiae str. PG2, Mycoplasma agalactiae strain PG2
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