Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MAG7120 | xer1 | MAG7120 | MAG7110 | Conserved hypothetical protein. | Integrase recombinase. | 0.497 |
| polA | recA | MAG1650 | MAG5500 | DNA polymerase I: 5' 3' exonuclease domain. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.999 |
| polA | topA | MAG1650 | MAG2750 | DNA polymerase I: 5' 3' exonuclease domain. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.961 |
| polA | vpmaZ | MAG1650 | MAG7100 | DNA polymerase I: 5' 3' exonuclease domain. | Variable surface lipoprotein D (VpmaZprecursor). | 0.521 |
| polA | xer1 | MAG1650 | MAG7110 | DNA polymerase I: 5' 3' exonuclease domain. | Integrase recombinase. | 0.549 |
| recA | polA | MAG5500 | MAG1650 | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | DNA polymerase I: 5' 3' exonuclease domain. | 0.999 |
| recA | topA | MAG5500 | MAG2750 | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.941 |
| recA | xer1 | MAG5500 | MAG7110 | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | Integrase recombinase. | 0.537 |
| topA | polA | MAG2750 | MAG1650 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | DNA polymerase I: 5' 3' exonuclease domain. | 0.961 |
| topA | recA | MAG2750 | MAG5500 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.941 |
| topA | vpmaZ | MAG2750 | MAG7100 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | Variable surface lipoprotein D (VpmaZprecursor). | 0.472 |
| topA | xer1 | MAG2750 | MAG7110 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | Integrase recombinase. | 0.582 |
| vpmaU | vpmaY | MAG7090 | MAG7080 | Variable surface lipoprotein U (VpmaUprecursor). | Variable surface lipoprotein Y (VpmaYprecursor). | 0.489 |
| vpmaU | xer1 | MAG7090 | MAG7110 | Variable surface lipoprotein U (VpmaUprecursor). | Integrase recombinase. | 0.530 |
| vpmaV | vpmaW | MAG7050 | MAG7060 | Variable surface lipoprotein V (VpmaVprecursor). | Variable surface lipoprotein W (VpmaWprecursor). | 0.554 |
| vpmaV | xer1 | MAG7050 | MAG7110 | Variable surface lipoprotein V (VpmaVprecursor). | Integrase recombinase. | 0.530 |
| vpmaW | vpmaV | MAG7060 | MAG7050 | Variable surface lipoprotein W (VpmaWprecursor). | Variable surface lipoprotein V (VpmaVprecursor). | 0.554 |
| vpmaW | xer1 | MAG7060 | MAG7110 | Variable surface lipoprotein W (VpmaWprecursor). | Integrase recombinase. | 0.545 |
| vpmaX | xer1 | MAG7070 | MAG7110 | Variable surface lipoprotein A (vpmaXprecusor). | Integrase recombinase. | 0.530 |
| vpmaY | vpmaU | MAG7080 | MAG7090 | Variable surface lipoprotein Y (VpmaYprecursor). | Variable surface lipoprotein U (VpmaUprecursor). | 0.489 |
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