Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MAG7440ABC transporter permease protein. (2723 aa)    
Predicted Functional Partners:
MAG7430
ABC transporter ATP binding protein.
 
 
 0.989
MAG6650
Conserved hypothetical protein.
  
     0.764
MAG7360
Conserved hypothetical protein.
  
     0.763
MAG1280
Conserved hypothetical protein.
 
   
 0.748
MAG0480
Conserved hypothetical protein.
 
     0.747
MAG7030
Conserved hypothetical protein.
 
     0.720
nusB
Transcription termination factor (NusB).
 
     0.705
MAG4820
Conserved hypothetical protein.
  
     0.701
MAG4540
Conserved hypothetical protein.
 
     0.687
MAG1000
Conserved hypothetical protein, predictedlipoprotein.
 
   
 0.670
Your Current Organism:
Mycoplasma agalactiae PG2
NCBI taxonomy Id: 347257
Other names: M. agalactiae PG2, Mycoplasma agalactiae str. PG2, Mycoplasma agalactiae strain PG2
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