A0A2P5AMT8 protein (Parasponia andersonii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2P5AMT8

Membrane attack complex component/perforin (MACPF) domain containing protein. (614 aa)

Predicted Functional Partners:

A0A2P5CXQ0

0.524

A0A2P5AJ90

0.519

A0A2P5BPU8

0.516

A0A2P5BPX4

0.516

A0A2P5CNL4

0.516

A0A2P5CXV8

0.514

PanIAA28

0.514

A0A2P5DJG5

0.514

A0A2P5BZI8

0.513

A0A2P5C944

0.512

Your Current Organism:

Parasponia andersonii

NCBI taxonomy Id: 3476
Other names: P. andersonii, Parasponia andersonii Planch.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2P5AJ90	A0A2P5AMT8	A0A2P5AJ90	A0A2P5AMT8	Methyltransferase.	Membrane attack complex component/perforin (MACPF) domain containing protein.	0.519
A0A2P5AJ90	A0A2P5CXQ0	A0A2P5AJ90	A0A2P5CXQ0	Methyltransferase.	Trichome birefringence-like family.	0.503
A0A2P5AJ90	A0A2P5CXV8	A0A2P5AJ90	A0A2P5CXV8	Methyltransferase.	Mediator of RNA polymerase II transcription subunit.	0.435
A0A2P5AJ90	PanIAA28	A0A2P5AJ90	A0A2P5D3I4	Methyltransferase.	Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.	0.507
A0A2P5AMT8	A0A2P5AJ90	A0A2P5AMT8	A0A2P5AJ90	Membrane attack complex component/perforin (MACPF) domain containing protein.	Methyltransferase.	0.519
A0A2P5AMT8	A0A2P5BPU8	A0A2P5AMT8	A0A2P5BPU8	Membrane attack complex component/perforin (MACPF) domain containing protein.	Methyltransferase.	0.516
A0A2P5AMT8	A0A2P5BPX4	A0A2P5AMT8	A0A2P5BPX4	Membrane attack complex component/perforin (MACPF) domain containing protein.	Methyltransferase.	0.516
A0A2P5AMT8	A0A2P5BZI8	A0A2P5AMT8	A0A2P5BZI8	Membrane attack complex component/perforin (MACPF) domain containing protein.	Exonuclease/helicase-like; Belongs to the argonaute family.	0.513
A0A2P5AMT8	A0A2P5C944	A0A2P5AMT8	A0A2P5C944	Membrane attack complex component/perforin (MACPF) domain containing protein.	Methyltransferase.	0.512
A0A2P5AMT8	A0A2P5CNL4	A0A2P5AMT8	A0A2P5CNL4	Membrane attack complex component/perforin (MACPF) domain containing protein.	Methyltransferase.	0.516
A0A2P5AMT8	A0A2P5CXQ0	A0A2P5AMT8	A0A2P5CXQ0	Membrane attack complex component/perforin (MACPF) domain containing protein.	Trichome birefringence-like family.	0.524
A0A2P5AMT8	A0A2P5CXV8	A0A2P5AMT8	A0A2P5CXV8	Membrane attack complex component/perforin (MACPF) domain containing protein.	Mediator of RNA polymerase II transcription subunit.	0.514
A0A2P5AMT8	A0A2P5DJG5	A0A2P5AMT8	A0A2P5DJG5	Membrane attack complex component/perforin (MACPF) domain containing protein.	Methyltransferase.	0.514
A0A2P5AMT8	PanIAA28	A0A2P5AMT8	A0A2P5D3I4	Membrane attack complex component/perforin (MACPF) domain containing protein.	Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.	0.514
A0A2P5BPU8	A0A2P5AMT8	A0A2P5BPU8	A0A2P5AMT8	Methyltransferase.	Membrane attack complex component/perforin (MACPF) domain containing protein.	0.516
A0A2P5BPU8	A0A2P5BPX4	A0A2P5BPU8	A0A2P5BPX4	Methyltransferase.	Methyltransferase.	0.602
A0A2P5BPU8	A0A2P5CXQ0	A0A2P5BPU8	A0A2P5CXQ0	Methyltransferase.	Trichome birefringence-like family.	0.524
A0A2P5BPU8	A0A2P5CXV8	A0A2P5BPU8	A0A2P5CXV8	Methyltransferase.	Mediator of RNA polymerase II transcription subunit.	0.490
A0A2P5BPU8	A0A2P5DJG5	A0A2P5BPU8	A0A2P5DJG5	Methyltransferase.	Methyltransferase.	0.539
A0A2P5BPU8	PanIAA28	A0A2P5BPU8	A0A2P5D3I4	Methyltransferase.	Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.	0.499