STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5AWG5Flavodoxin-like. (656 aa)    
Predicted Functional Partners:
A0A2P5B544
BTB-kelch protein.
  
 
 0.762
A0A2P5A456
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
    
  0.660
A0A2P5A4F9
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
    
  0.660
A0A2P5E0I0
Uroporphyrinogen decarboxylase.
    
  0.660
A0A2P5DGC9
Protein-L-isoaspartate(D-aspartate) O-methyltransferase.
   
    0.609
A0A2P5AP51
tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.
   
 
 0.509
A0A2P5DJA1
tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.
   
 
 0.509
A0A2P5DQW8
Guanine nucleotide-binding protein, beta subunit.
   
 
 0.508
A0A2P5AX22
Guanine nucleotide-binding protein, beta subunit.
   
    0.495
A0A2P5AQ06
Guanine nucleotide-binding protein, beta subunit.
   
    0.493
Your Current Organism:
Parasponia andersonii
NCBI taxonomy Id: 3476
Other names: P. andersonii, Parasponia andersonii Planch.
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