STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5AZ13ACT domain containing protein. (416 aa)    
Predicted Functional Partners:
A0A2P5A6A9
TFIIH C1-like domain containing protein.
    
 0.852
A0A2P5CLI8
Zinc finger, FYVE/PHD-type domain containing protein.
    
  0.807
A0A2P5DQC8
Zinc finger, PHD-type domain containing protein.
    
  0.807
A0A2P5AW75
DNA-directed RNA polymerase, alpha subunit.
    
 0.791
A0A2P5E420
Uncharacterized protein.
    
 0.785
A0A2P5CLL0
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.762
A0A2P5CCD8
RNA polymerase II, Rpb.
    
  0.757
A0A2P5DG58
DNA-directed RNA polymerase, subunit RPB.
    
  0.755
A0A2P5A5G3
Histone H2B; Belongs to the histone H2B family.
   
 0.753
A0A2P5AFZ0
Histone H2B; Belongs to the histone H2B family.
   
 0.753
Your Current Organism:
Parasponia andersonii
NCBI taxonomy Id: 3476
Other names: P. andersonii, Parasponia andersonii Planch.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.