STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5BEV1Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin. In the C-terminal section; belongs to the pectinesterase family. (523 aa)    
Predicted Functional Partners:
PanPLL6
Pectate lyase.
  
 
  0.921
A0A2P5DHS5
Pectate lyase.
  
 
  0.920
PanPLL7
Pectate lyase.
  
 
  0.914
PanPLL2
Pectate lyase.
   
 
 0.900
PanPLL8
Pectate lyase.
   
 
  0.897
PanPLL9
Pectate lyase.
   
 
  0.897
PanPLL10
Pectate lyase.
   
 
  0.897
PanPLL1
Pectate lyase.
   
 
 0.891
A0A2P5AYA6
Pectate lyase.
   
 
  0.881
A0A2P5BUM4
Glycoside hydrolase.
     
 0.880
Your Current Organism:
Parasponia andersonii
NCBI taxonomy Id: 3476
Other names: P. andersonii, Parasponia andersonii Planch.
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