A0A2P5BHV1 protein (Parasponia andersonii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2P5BHV1

Guanine nucleotide-binding protein, beta subunit. (439 aa)

Predicted Functional Partners:

A0A2P5C133

0.930

A0A2P5CUN2

0.768

A0A2P5AGN7

0.756

A0A2P5DIN5

0.755

A0A2P5BZS4

0.750

A0A2P5C2V5

0.747

A0A2P5DQU3

0.747

A0A2P5B3I5

0.723

A0A2P5BFY3

0.721

A0A2P5BWJ8

0.717

Your Current Organism:

Parasponia andersonii

NCBI taxonomy Id: 3476
Other names: P. andersonii, Parasponia andersonii Planch.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2P5AGN7	A0A2P5BHV1	Transcription initiation factor.	Guanine nucleotide-binding protein, beta subunit.	0.756
A0A2P5AGN7	A0A2P5BWJ8	Transcription initiation factor.	TAFII55 protein, conserved region.	0.999
A0A2P5AGN7	A0A2P5BZS4	Transcription initiation factor.	Histone-fold protein.	0.999
A0A2P5AGN7	A0A2P5C2V5	Transcription initiation factor.	TATA-box binding protein.	0.999
A0A2P5AGN7	A0A2P5DIN5	Transcription initiation factor.	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	0.999
A0A2P5B3I5	A0A2P5BHV1	Pre-rRNA-processing protein IPI1/Testis-expressed sequence 10 protein.	Guanine nucleotide-binding protein, beta subunit.	0.723
A0A2P5BFY3	A0A2P5BHV1	Ubiquitinyl hydrolase; Belongs to the peptidase C19 family.	Guanine nucleotide-binding protein, beta subunit.	0.721
A0A2P5BHV1	A0A2P5AGN7	Guanine nucleotide-binding protein, beta subunit.	Transcription initiation factor.	0.756
A0A2P5BHV1	A0A2P5B3I5	Guanine nucleotide-binding protein, beta subunit.	Pre-rRNA-processing protein IPI1/Testis-expressed sequence 10 protein.	0.723
A0A2P5BHV1	A0A2P5BFY3	Guanine nucleotide-binding protein, beta subunit.	Ubiquitinyl hydrolase; Belongs to the peptidase C19 family.	0.721
A0A2P5BHV1	A0A2P5BWJ8	Guanine nucleotide-binding protein, beta subunit.	TAFII55 protein, conserved region.	0.717
A0A2P5BHV1	A0A2P5BZS4	Guanine nucleotide-binding protein, beta subunit.	Histone-fold protein.	0.750
A0A2P5BHV1	A0A2P5C133	Guanine nucleotide-binding protein, beta subunit.	Zinc finger, CCCH-type domain containing protein.	0.930
A0A2P5BHV1	A0A2P5C2V5	Guanine nucleotide-binding protein, beta subunit.	TATA-box binding protein.	0.747
A0A2P5BHV1	A0A2P5CUN2	Guanine nucleotide-binding protein, beta subunit.	Mitotic spindle checkpoint protein Mad.	0.768
A0A2P5BHV1	A0A2P5DIN5	Guanine nucleotide-binding protein, beta subunit.	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	0.755
A0A2P5BHV1	A0A2P5DQU3	Guanine nucleotide-binding protein, beta subunit.	N-terminal acetyltransferase A, auxiliary subunit.	0.747
A0A2P5BWJ8	A0A2P5AGN7	TAFII55 protein, conserved region.	Transcription initiation factor.	0.999
A0A2P5BWJ8	A0A2P5BHV1	TAFII55 protein, conserved region.	Guanine nucleotide-binding protein, beta subunit.	0.717
A0A2P5BWJ8	A0A2P5BZS4	TAFII55 protein, conserved region.	Histone-fold protein.	0.999