STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5BJQ8Small GTP-binding domain containing protein. (211 aa)    
Predicted Functional Partners:
A0A2P5A604
Rab3-GAP regulatory subunit.
     
 0.736
A0A2P5BG94
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
     
 0.680
A0A2P5A912
Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family.
     
 0.655
A0A2P5A7G8
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
   
  0.583
A0A2P5AQG4
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
   
  0.583
A0A2P5BG75
GDP dissociation inhibitor.
   
  0.583
A0A2P5CFQ8
Rab3 GTPase-activating protein catalytic subunit.
    
 0.554
A0A2P5CFS3
Rab3 GTPase-activating protein catalytic subunit.
    
 0.554
A0A2P5CFS5
Rab3 GTPase-activating protein catalytic subunit.
    
 0.554
A0A2P5CNS8
Rab3 GTPase-activating protein catalytic subunit.
    
 0.554
Your Current Organism:
Parasponia andersonii
NCBI taxonomy Id: 3476
Other names: P. andersonii, Parasponia andersonii Planch.
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