Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A2P5ACG5 | A0A2P5AIH9 | Splicing factor-like protein. | Ribosome biogenesis protein RLP. | 0.999 |
A0A2P5ACG5 | A0A2P5AIJ9 | Splicing factor-like protein. | Brix domain containing protein. | 0.999 |
A0A2P5ACG5 | A0A2P5AYH5 | Splicing factor-like protein. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.999 |
A0A2P5ACG5 | A0A2P5B0I3 | Splicing factor-like protein. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.989 |
A0A2P5ACG5 | A0A2P5BD22 | Splicing factor-like protein. | Ribosomal protein. | 0.929 |
A0A2P5ACG5 | A0A2P5BQM4 | Splicing factor-like protein. | Peptidase M24, methionine aminopeptidase. | 0.977 |
A0A2P5ACG5 | A0A2P5C6V9 | Splicing factor-like protein. | Ferrous iron transport protein B. | 0.990 |
A0A2P5ACG5 | A0A2P5CDB0 | Splicing factor-like protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.990 |
A0A2P5ACG5 | A0A2P5CH13 | Splicing factor-like protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.999 |
A0A2P5ACG5 | A0A2P5D0E6 | Splicing factor-like protein. | Ribosomal protein. | 0.943 |
A0A2P5AIH9 | A0A2P5ACG5 | Ribosome biogenesis protein RLP. | Splicing factor-like protein. | 0.999 |
A0A2P5AIH9 | A0A2P5AIJ9 | Ribosome biogenesis protein RLP. | Brix domain containing protein. | 0.999 |
A0A2P5AIH9 | A0A2P5AYH5 | Ribosome biogenesis protein RLP. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.999 |
A0A2P5AIH9 | A0A2P5B0I3 | Ribosome biogenesis protein RLP. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.992 |
A0A2P5AIH9 | A0A2P5BD22 | Ribosome biogenesis protein RLP. | Ribosomal protein. | 0.986 |
A0A2P5AIH9 | A0A2P5BQM4 | Ribosome biogenesis protein RLP. | Peptidase M24, methionine aminopeptidase. | 0.986 |
A0A2P5AIH9 | A0A2P5C6V9 | Ribosome biogenesis protein RLP. | Ferrous iron transport protein B. | 0.996 |
A0A2P5AIH9 | A0A2P5CDB0 | Ribosome biogenesis protein RLP. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.996 |
A0A2P5AIH9 | A0A2P5CH13 | Ribosome biogenesis protein RLP. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.999 |
A0A2P5AIH9 | A0A2P5D0E6 | Ribosome biogenesis protein RLP. | Ribosomal protein. | 0.978 |
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