STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5BX43Oxoglutarate/iron-dependent dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family. (307 aa)    
Predicted Functional Partners:
PanNIT1
Nitrilase/cyanide hydratase.
   
 
  0.652
A0A2P5DE31
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.650
A0A2P5C6P2
PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related.
     
 0.505
A0A2P5DIR4
Succinylglutamate-semialdehyde dehydrogenase.
     
 0.497
A0A2P5DIV9
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.497
A0A2P5CDG2
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.485
A0A2P5CDH7
Aldehyde/histidinol dehydrogenase.
     
 0.485
A0A2P5C7H2
Oxoglutarate/iron-dependent dioxygenase.
  
     0.435
PanNIT2
Transcription factor.
   
 
  0.412
Your Current Organism:
Parasponia andersonii
NCBI taxonomy Id: 3476
Other names: P. andersonii, Parasponia andersonii Planch.
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