STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5CEZ6Coatomer beta subunit. (3709 aa)    
Predicted Functional Partners:
A0A2P5D7J3
Coatomer beta subunit.
   
0.848
A0A2P5C9W8
Coatomer beta subunit.
   
 
0.833
A0A2P5APU0
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
  
 
 0.830
A0A2P5DFC4
Ubiquitin.
    
 0.686
A0A2P5DQ91
ATPase, OSCP/delta subunit.
    
 0.686
A0A2P5DXK7
Ribosomal protein.
    
 0.686
A0A2P5B352
Ubiquitin.
   
 0.679
A0A2P5BUM9
Ubiquitin.
   
 0.679
A0A2P5AXT6
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
    
 0.671
A0A2P5E3P5
Trichome birefringence-like family.
    
 0.624
Your Current Organism:
Parasponia andersonii
NCBI taxonomy Id: 3476
Other names: P. andersonii, Parasponia andersonii Planch.
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