STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PanBLH9Knotted like homeodomain transcription factor. (659 aa)    
Predicted Functional Partners:
PanKNOX3
Knotted-like homeobox transcription factor.
  
 
 
0.755
PanKNOX1
Knotted-like homeobox transcription factor.
    
  
0.499
PanKNOX2
Knotted-like homeobox transcription factor.
    
  
0.499
PanSTM
Knotted like homeobox transcription factor.
    
  
0.499
PanZnF12
Zinc finger transcription factor.
  
 
   0.453
PanZnF25
Zinc finger transcription factor.
  
 
 
 0.451
A0A2P5E4J9
Tyrosine-protein kinase.
  
     0.425
A0A2P5CPD4
Peptidase M1, alanyl aminopeptidase.
      
 0.414
A0A2P5C1T9
VQ motif containing protein.
  
     0.401
Your Current Organism:
Parasponia andersonii
NCBI taxonomy Id: 3476
Other names: P. andersonii, Parasponia andersonii Planch.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.