STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5CQL2Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (356 aa)    
Predicted Functional Partners:
A0A2P5CRV0
Dihydroxy-acid dehydratase.
  
 0.964
A0A2P5CS16
Dihydroxy-acid/6-phosphogluconate dehydratase.
  
 0.964
PanIPMS2
2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 0.957
PanIPMS1
2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 0.955
PanOMR1
Threonine dehydratase.
  
 
 0.941
A0A2P5AHY0
Aspartate kinase, monofunctional class.
  
 
 0.938
A0A2P5DPL8
Homoserine kinase.
  
 
 0.926
A0A2P5A6V9
Transketolase.
   
 0.922
A0A2P5D466
Ketopantoate hydroxymethyltransferase.
    
 0.920
A0A2P5AAL8
Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 
 0.919
Your Current Organism:
Parasponia andersonii
NCBI taxonomy Id: 3476
Other names: P. andersonii, Parasponia andersonii Planch.
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