STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5CWG9Polyribonucleotide nucleotidyltransferase. (551 aa)    
Predicted Functional Partners:
A0A2P5B6N9
Nuclear cap-binding protein subunit 2.
    
 0.663
A0A2P5B0C3
Nuclear cap-binding protein subunit.
   
 0.648
A0A2P5CLL0
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
  0.546
A0A2P5BH13
Pre-mRNA-processing-splicing factor.
   
   0.532
A0A2P5DG58
DNA-directed RNA polymerase, subunit RPB.
   
 
  0.522
A0A2P5CCD8
RNA polymerase II, Rpb.
    
  0.519
A0A2P5ABX0
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
    
  0.498
A0A2P5AW75
DNA-directed RNA polymerase, alpha subunit.
   
 
  0.498
A0A2P5DNX7
GRIP/coiled-coil protein.
      
 0.495
A0A2P5C9D4
RNA polymerase II, Rpb.
    
  0.474
Your Current Organism:
Parasponia andersonii
NCBI taxonomy Id: 3476
Other names: P. andersonii, Parasponia andersonii Planch.
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